covid 19 image classification

Chowdhury, M.E. etal. The following stage was to apply Delta variants. Duan, H. et al. Can ai help in screening viral and covid-19 pneumonia? (20), $FAD=0.2$, and W is a binary solution (0 or 1) that corresponded to random solutions. Table3 shows the numerical results of the feature selection phase for both datasets. Whereas, the worst algorithm was BPSO. This stage can be mathematically implemented as below: In Eq. <span> <h5>Background</h5> <p>The COVID19 pandemic has precipitated global apprehensions about increased fatalities and raised concerns about gaps in healthcare . In this paper, we apply a convolutional neural network (CNN) to extract features from COVID-19 X-Ray images. 2020-09-21 . Eur. Epub 2022 Mar 3. While no feature selection was applied to select best features or to reduce model complexity. A. et al. All classication models ever, the virus mutates, and new variants emerge and dis- performed better in classifying the Non-COVID-19 images appear. J. Med. Inceptions layer details and layer parameters of are given in Table1. 4a, the SMA was considered as the fastest algorithm among all algorithms followed by BPSO, FO-MPA, and HHO, respectively, while MPA was the slowest algorithm. They applied the SVM classifier for new MRI images to segment brain tumors, automatically. Fractional Differential Equations: An Introduction to Fractional Derivatives, Fdifferential Equations, to Methods of their Solution and Some of Their Applications Vol. Finally, the predator follows the levy flight distribution to exploit its prey location. & SHAH, S. S.H. The diagnostic evaluation of convolutional neural network (cnn) for the assessment of chest x-ray of patients infected with covid-19. Syst. where $fi_{i}$ represents the importance of feature I, while $ni_{j}$ refers to the importance of node j. Toaar, M., Ergen, B. However, WOA showed the worst performances in these measures; which means that if it is run in the same conditions several times, the same results will be obtained. E. B., Traina-Jr, C. & Traina, A. J. Whereas, FO-MPA, MPA, HGSO, and WOA showed similar STD results. Regarding the consuming time as in Fig. EMRes-50 model . Metric learning Metric learning can create a space in which image features within the. et al. In the current work, the values of k, and $\zeta$ are set to 2, and 2, respectively. The COVID-19 pandemic has been having a severe and catastrophic effect on humankind and is being considered the most crucial health calamity of the century. To address this challenge, this paper proposes a two-path semi- supervised deep learning model, ssResNet, based on Residual Neural Network (ResNet) for COVID-19 image classification, where two paths refer to a supervised path and an unsupervised path, respectively. Also, WOA algorithm showed good results in all measures, unlike dataset 1, which can conclude that no algorithm can solve all kinds of problems. Bibliographic details on CECT: Controllable Ensemble CNN and Transformer for COVID-19 image classification by capturing both local and global image features. Convolutional neural networks were implemented in Python 3 under Google Colaboratory46, commonly referred to as Google Colab, which is a research project for prototyping machine learning models on powerful hardware options such as GPUs and TPUs. Sign up for the Nature Briefing newsletter what matters in science, free to your inbox daily. Four measures for the proposed method and the compared algorithms are listed. The combination of SA and GA showed better performances than the original SA and GA. Narayanan et al.33 proposed a fuzzy particle swarm optimization (PSO) as an FS method to enhance the classification of CT images of emphysema. & Mirjalili, S. Slime mould algorithm: A new method for stochastic optimization. Continuing on my commitment to share small but interesting things in Google Cloud, this time I created a model for a Kong, Y., Deng, Y. We are hiring! Duan et al.13 applied the Gaussian mixture model (GMM) to extract features from pulmonary nodules from CT images. As seen in Fig. Syst. FC provides a clear interpretation of the memory and hereditary features of the process. Nguyen, L.D., Lin, D., Lin, Z. Inspired by this concept, Faramarzi et al.37 developed the MPA algorithm by considering both of a predator a prey as solutions. They applied a fuzzy decision tree classifier, and they found that fuzzy PSO improved the classification accuracy. and A.A.E. medRxiv (2020). arXiv preprint arXiv:1409.1556 (2014). Inspired by our recent work38, where VGG-19 besides statistically enhanced Salp Swarm Algorithm was applied to select the best features for White Blood Cell Leukaemia classification. For diagnosing COVID-19, the RT-PCR (real-time polymerase chain reaction) is a standard diagnostic test, but, it can be considered as a time-consuming test, more so, it also suffers from false negative diagnosing4. Recently, a combination between the fractional calculus tool and the meta-heuristics opens new doors in providing robust and reliable variants41. The whole dataset contains around 200 COVID-19 positive images and 1675 negative COVID19 images. As a result, the obtained outcomes outperformed previous works in terms of the models general performance measure. 4b, FO-MPA algorithm selected successfully fewer features than other algorithms, as it selected 130 and 86 features from Dataset 1 and Dataset 2, respectively. Background The large volume and suboptimal image quality of portable chest X-rays (CXRs) as a result of the COVID-19 pandemic could post significant challenges for radiologists and frontline physicians. Evaluation outcomes showed that GA based FS methods outperformed traditional approaches, such as filter based FS and traditional wrapper methods. (14)-(15) are implemented in the first half of the agents that represent the exploitation. Methods Med. Transmission scenarios for middle east respiratory syndrome coronavirus (mers-cov) and how to tell them apart. In my thesis project, I developed an image classification model to detect COVID-19 on chest X-ray medical data using deep learning models such . & Mahmoud, N. Feature selection based on hybrid optimization for magnetic resonance imaging brain tumor classification and segmentation. However, the proposed IMF approach achieved the best results among the compared algorithms in least time. Ozturk et al. Get the most important science stories of the day, free in your inbox. Mobilenets: Efficient convolutional neural networks for mobile vision applications. (22) can be written as follows: By taking into account the early mentioned relation in Eq. arXiv preprint arXiv:2004.05717 (2020). Number of extracted feature and classification accuracy by FO-MPA compared to other CNNs on dataset 1 (left) and on dataset 2 (right). COVID-19 Chest X -Ray Image Classification with Neural Network Currently we are suffering from COVID-19, and the situation is very serious. The variants of concern are Alpha, Beta, Gamma, and than the COVID-19 images. With accounting the first four previous events ($m=4$) from the memory data with derivative order $\delta$, the position of prey can be modified as follow; Second: Adjusting $R_B$ random parameter based on weibull distribution. The 30-volume set, comprising the LNCS books 12346 until 12375, constitutes the refereed proceedings of the 16th European Conference on Computer Vision, ECCV 2020, which was planned to be held in Glasgow, UK, during August 23-28, 2020. To obtain Wish you all a very happy new year ! While the second half of the agents perform the following equations. Cohen, J.P., Morrison, P. & Dao, L. Covid-19 image data collection. In Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition12511258 (2017). A survey on deep learning in medical image analysis. Contribute to hellorp1990/Covid-19-USF development by creating an account on GitHub. COVID-19 image classification using deep features and fractional-order marine predators algorithm Authors. Johnson et al.31 applied the flower pollination algorithm (FPA) to select features from CT images of the lung, to detect lung cancers. Propose similarity regularization for improving C. An efficient feature generation approach based on deep learning and feature selection techniques for traffic classification. Sci. In this paper, we proposed a novel COVID-19 X-ray classification approach, which combines a CNN as a sufficient tool to extract features from COVID-19 X-ray images. CNNs are more appropriate for large datasets. They shared some parameters, such as the total number of iterations and the number of agents which were set to 20 and 15, respectively. In this subsection, the results of FO-MPA are compared against most popular and recent feature selection algorithms, such as Whale Optimization Algorithm (WOA)49, Henry Gas Solubility optimization (HGSO)50, Sine cosine Algorithm (SCA), Slime Mould Algorithm (SMA)51, Particle Swarm Optimization (PSO), Grey Wolf Optimization (GWO)52, Harris Hawks Optimization (HHO)53, Genetic Algorithm (GA), and basic MPA. In this work, the MPA is enhanced by fractional calculus memory feature, as a result, Fractional-order Marine Predators Algorithm (FO-MPA) is introduced. In this paper, we propose an improved hybrid classification approach for COVID-19 images by combining the strengths of CNNs (using a powerful architecture called Inception) to extract features and a swarm-based feature selection algorithm (Marine Predators Algorithm) to select the most relevant features. The Softmax activation function is used for this purpose because the output should be binary (positive COVID-19 negative COVID-19). The results of max measure (as in Eq. The focus of this study is to evaluate and examine a set of deep learning transfer learning techniques applied to chest radiograph images for the classification of COVID-19, normal (healthy), and pneumonia. Also, it has killed more than 376,000 (up to 2 June 2020) [Coronavirus disease (COVID-2019) situation reports: (https://www.who.int/emergencies/diseases/novel-coronavirus-2019/situation-reports/)]. (18)(19) for the second half (predator) as represented below. and M.A.A.A. & Zhu, Y. Kernel feature selection to fuse multi-spectral mri images for brain tumor segmentation. Etymology. Math. Inf. The model was developed using Keras library47 with Tensorflow backend48. IEEE Trans. Performance analysis of neural networks for classification of medical images with wavelets as a feature extractor. In57, ResNet-50 CNN has been applied after applying horizontal flipping, random rotation, random zooming, random lighting, and random wrapping on raw images. Comput. To evaluate the performance of the proposed model, we computed the average of both best values and the worst values (Max) as well as STD and computational time for selecting features. Software available from tensorflow. 92, 103662. https://doi.org/10.1016/j.engappai.2020.103662 (2020). Cancer 48, 441446 (2012). However, it was clear that VGG19 and MobileNet achieved the best performance over other CNNs. International Conference on Machine Learning647655 (2014). (2) To extract various textural features using the GLCM algorithm. 42, 6088 (2017). The 1360 revised papers presented in these proceedings were carefully reviewed and selected from . We adopt a special type of CNN called a pre-trained model where the network is previously trained on the ImageNet dataset, which contains millions of variety of images (animal, plants, transports, objects,..) on 1000 classe categories. Initialization phase: this phase devotes for providing a random set of solutions for both the prey and predator via the following formulas: where the Lower and Upper are the lower and upper boundaries in the search space, $rand_1$ is a random vector $\in$ the interval of (0,1). A properly trained CNN requires a lot of data and CPU/GPU time. Stage 3: This stage executed on the last third of the iteration numbers ($t>\frac{2}{3}t_{max}$) where based on the following formula: Eddy formation and Fish Aggregating Devices effect: Faramarzi et al.37 considered the external impacts from the environment, such as the eddy formation or Fish Aggregating Devices (FADs) effects to avoid the local optimum solutions. 35, 1831 (2017). The authors declare no competing interests. MPA simulates the main aim for most creatures that is searching for their foods, where a predator contiguously searches for food as well as the prey. Layers are applied to extract different types of features such as edges, texture, colors, and high-lighted patterns from the images. Chong, D. Y. et al. It achieves a Dice score of 0.9923 for segmentation, and classification accuracies of 0. As seen in Table1, we keep the last concatenation layer which contains the extracted features, so we removed the top layers such as the Flatten, Drop out and the Dense layers which the later performs classification (named as FC layer). 4 and Table4 list these results for all algorithms. In54, AlexNet pre-trained network was used to extract deep features then applied PCA to select the best features by eliminating highly correlated features. The conference was held virtually due to the COVID-19 pandemic. I. S. of Medical Radiology. For the image features that led to categorization, there were varied levels of agreement in the interobserver and intraobserver components that . Health Inf. Mirjalili, S., Mirjalili, S. M. & Lewis, A. Grey wolf optimizer. In this work, we have used four transfer learning models, VGG16, InceptionV3, ResNet50, and DenseNet121 for the classification tasks. M.A.E. The given Kaggle dataset consists of chest CT scan images of patients suffering from the novel COVID-19, other pulmonary disorders, and those of healthy patients. A.A.E. Very deep convolutional networks for large-scale image recognition. Google Scholar. Automated detection of covid-19 cases using deep neural networks with x-ray images. All data used in this paper is available online in the repository, [https://github.com/ieee8023/covid-chestxray-dataset], [https://stanfordmlgroup.github.io/projects/chexnet], [https://www.kaggle.com/paultimothymooney/chest-xray-pneumonia] and [https://www.sirm.org/en/category/articles/covid-19-database/]. Liao, S. & Chung, A. C. Feature based nonrigid brain mr image registration with symmetric alpha stable filters. arXiv preprint arXiv:2003.13815 (2020). where CF is the parameter that controls the step size of movement for the predator. Al-qaness, M. A., Ewees, A. Our proposed approach is called Inception Fractional-order Marine Predators Algorithm (IFM), where we combine Inception (I) with Fractional-order Marine Predators Algorithm (FO-MPA). Li et al.34 proposed a self-adaptive bat algorithm (BA) to address two problems in lung X-ray images, rebalancing, and feature selection. where r is the run numbers. Dual feature selection and rebalancing strategy using metaheuristic optimization algorithms in x-ray image datasets. If material is not included in the article's Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. Machine learning (ML) methods can play vital roles in identifying COVID-19 patients by visually analyzing their chest x-ray images. Adv. The main contributions of this study are elaborated as follows: Propose an efficient hybrid classification approach for COVID-19 using a combination of CNN and an improved swarm-based feature selection algorithm. Abbas, A., Abdelsamea, M.M. & Gaber, M.M. Classification of covid-19 in chest x-ray images using detrac deep convolutional neural network. The symbol $R_B$ refers to Brownian motion. In Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, 19 (2015). Med. The first one is based on Python, where the deep neural network architecture (Inception) was built and the feature extraction part was performed. In this experiment, the selected features by FO-MPA were classified using KNN. Besides, the used statistical operations improve the performance of the FO-MPA algorithm because it supports the algorithm in selecting only the most important and relevant features. Improving the ranking quality of medical image retrieval using a genetic feature selection method. 11314, 113142S (International Society for Optics and Photonics, 2020). Aiming at the problems of poor attention to existing translation models, the insufficient ability of key transfer and generation, insufficient quality of generated images, and lack of detailed features, this paper conducts research on lung medical image translation and lung image classification based on . IEEE Signal Process. (9) as follows. Imaging 35, 144157 (2015). However, some of the extracted features by CNN might not be sufficient, which may affect negatively the quality of the classification images. The evaluation showed that the RDFS improved SVM robustness against reconstruction kernel and slice thickness. CAS Then, applying the FO-MPA to select the relevant features from the images. Moreover, we design a weighted supervised loss that assigns higher weight for . All authors discussed the results and wrote the manuscript together. 2. Ozturk, T. et al. COVID-19 image classification using deep features and fractional-order marine predators algorithm, $$\begin{aligned} \chi ^2=\sum _{k=1}^{n} \frac{(O_k - E_k)^2}{E_k} \end{aligned}$$, $$\begin{aligned} ni_{j}=w_{j}C_{j}-w_{left(j)}C_{left(j)}-w_{right(j)}C_{right(j)} \end{aligned}$$, $$\begin{aligned} fi_{i}=\frac{\sum _{j:node \mathbf \ {j} \ splits \ on \ feature \ i}ni_{j}}{\sum _{{k}\in all \ nodes }ni_{k}} \end{aligned}$$, $$\begin{aligned} normfi_{i}=\frac{fi_{i}}{\sum _{{j}\in all \ nodes }fi_{j}} \end{aligned}$$, $$\begin{aligned} REfi_{i}=\frac{\sum _{j \in all trees} normfi_{ij}}{T} \end{aligned}$$, $$\begin{aligned} D^{\delta }(U(t))=\lim \limits _{h \rightarrow 0} \frac{1}{h^\delta } \sum _{k=0}^{\infty }(-1)^{k} \begin{pmatrix} \delta \\ k\end{pmatrix} U(t-kh), \end{aligned}$$, $$\begin{aligned} \begin{pmatrix} \delta \\ k \end{pmatrix}= \frac{\Gamma (\delta +1)}{\Gamma (k+1)\Gamma (\delta -k+1)}= \frac{\delta (\delta -1)(\delta -2)\ldots (\delta -k+1)}{k! In this subsection, a comparison with relevant works is discussed. 43, 302 (2019). & Baby, C.J. Emphysema medical image classification using fuzzy decision tree with fuzzy particle swarm optimization clustering. Methods: We employed a public dataset acquired from 20 COVID-19 patients, which . Our dataset consisting of 60 chest CT images of COVID-19 and non-COVID-19 patients was pre-processed and segmented using a hybrid watershed and fuzzy c-means algorithm. ADS Imaging Syst. Podlubny, I. Google Scholar. This task is achieved by FO-MPA which randomly generates a set of solutions, each of them represents a subset of potential features. Purpose The study aimed at developing an AI . Table4 show classification accuracy of FO-MPA compared to other feature selection algorithms, where the best, mean, and STD for classification accuracy were calculated for each one, besides time consumption and the number of selected features (SF). It is also noted that both datasets contain a small number of positive COVID-19 images, and up to our knowledge, there is no other sufficient available published dataset for COVID-19. Knowl. It is calculated between each feature for all classes, as in Eq. The results are the best achieved on these datasets when compared to a set of recent feature selection algorithms. Med. They concluded that the hybrid method outperformed original fuzzy c-means, and it had less sensitive to noises. The dataset consists of 21,165 chest X-ray (CXR) COVID-19 images distributed on four categories which are COVID19, lung opacity, viral pneumonia, and NORMAL (Non-COVID). Nevertheless, a common mistake in COVID-19 dataset fusion, mainly on classification tasks, is that by mixing many datasets of COVID-19 and using as Control images another dataset, there will be . 198 (Elsevier, Amsterdam, 1998). Hence, the FC memory is applied during updating the prey locating in the second step of the algorithm to enhance the exploitation stage. The second CNN architecture classifies the X-ray image into three classes, i.e., normal, pneumonia, and COVID-19. A., Fan, H. & Abd ElAziz, M. Optimization method for forecasting confirmed cases of covid-19 in china. Use the Previous and Next buttons to navigate the slides or the slide controller buttons at the end to navigate through each slide. Appl. ISSN 2045-2322 (online). https://doi.org/10.1155/2018/3052852 (2018). Also, other recent published works39, who combined a CNN architecture with Weighted Symmetric Uncertainty (WSU) to select optimal features for traffic classification. In the meantime, to ensure continued support, we are displaying the site without styles So, based on this motivation, we apply MPA as a feature selector from deep features that produced from CNN (largely redundant), which, accordingly minimize capacity and resources consumption and can improve the classification of COVID-19 X-ray images. To survey the hypothesis accuracy of the models. New Images of Novel Coronavirus SARS-CoV-2 Now Available NIAID Now | February 13, 2020 This scanning electron microscope image shows SARS-CoV-2 (yellow)also known as 2019-nCoV, the virus that causes COVID-19isolated from a patient in the U.S., emerging from the surface of cells (blue/pink) cultured in the lab. The symbol $r\in [0,1]$ represents a random number. The test accuracy obtained for the model was 98%. These images have been further used for the classification of COVID-19 and non-COVID-19 images using ResNet50 and AlexNet convolutional neural network (CNN) models. It is important to detect positive cases early to prevent further spread of the outbreak. Classification of COVID19 using Chest X-ray Images in Keras 4.6 33 ratings Share Offered By In this Guided Project, you will: Learn to Build and Train the Convolutional Neural Network using Keras with Tensorflow as Backend Learn to Visualize Data in Matplotlib Learn to make use of the Trained Model to Predict on a New Set of Data 2 hours Comput. Although outbreaks of SARS and MERS had confirmed human to human transmission3, they had not the same spread speed and infection power of the new coronavirus (COVID-19). Covid-19 Classification Using Deep Learning in Chest X-Ray Images Abstract: Covid-19 virus, which has emerged in the Republic of China in an undetermined cause, has affected the whole world quickly. Stage 2 has been executed in the second third of the total number of iterations when $\frac{1}{3}t_{max}< t< \frac{2}{3}t_{max}$. Corona Virus lung infected X-Ray Images accessible by Kaggle a complete 590 images, which classified in 2 classes: typical and Covid-19. Internet Explorer). Med. ), such as $5\times 5$, $3 \times 3$, $1 \times 1$. Therefore, several pre-trained models have won many international image classification competitions such as VGGNet24, Resnet25, Nasnet26, Mobilenet27, Inception28 and Xception29. Among the FS methods, the metaheuristic techniques have been established their performance overall other FS methods when applied to classify medical images. Also, in58 a new CNN architecture called EfficientNet was proposed, where more blocks were added on top of the model after applying normalization of images pixels intensity to the range (0 to 1). The code of the proposed approach is also available via the following link [https://drive.google.com/file/d/1-oK-eeEgdCMCnykH364IkAK3opmqa9Rvasx/view?usp=sharing]. volume10, Articlenumber:15364 (2020) In Future of Information and Communication Conference, 604620 (Springer, 2020). 43, 635 (2020). Comput. In this paper, a new ML-method proposed to classify the chest x-ray images into two classes, COVID-19 patient or non-COVID-19 person. Whereas the worst one was SMA algorithm. Although convolutional neural networks (CNNs) is considered the current state-of-the-art image classification technique, it needs massive computational cost for deployment and training. arXiv preprint arXiv:1704.04861 (2017). \end{aligned} \end{aligned}$$, $$\begin{aligned} \begin{aligned} U_{i}(t+1)&= \frac{1}{1!} Blog, G. Automl for large scale image classification and object detection. Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. Also, some image transformations were applied, such as rotation, horizontal flip, and scaling. Objective: Lung image classification-assisted diagnosis has a large application market. 51, 810820 (2011). Comput. In general, feature selection (FS) methods are widely employed in various applications of medical imaging applications. TOKYO, Jan 26 (Reuters) - Japan is set to downgrade its classification of COVID-19 to that of a less serious disease on May 8, revising its measures against the coronavirus such as relaxing. AMERICAN JOURNAL OF EMERGENCY MEDICINE COVID-19: Facemask use prevalence in international airports in Asia, Europe and the Americas, March 2020 Marine memory: This is the main feature of the marine predators and it helps in catching the optimal solution very fast and avoid local solutions. They compared the BA to PSO, and the comparison outcomes showed that BA had better performance. Memory FC prospective concept (left) and weibull distribution (right). The lowest accuracy was obtained by HGSO in both measures. Luz, E., Silva, P.L., Silva, R. & Moreira, G. Towards an efficient deep learning model for covid-19 patterns detection in x-ray images. They used K-Nearest Neighbor (kNN) to classify x-ray images collected from Montgomery dataset, and it showed good performances. & Cmert, Z. COVID-19 (coronavirus disease 2019) is a new viral infection disease that is widely spread worldwide. PubMed Central Multimedia Tools Appl. In this paper, after applying Chi-square, the feature vector is minimized for both datasets from 51200 to 2000. Eurosurveillance 18, 20503 (2013). Zhu, H., He, H., Xu, J., Fang, Q.

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